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  5. Zm00001e019525_P002

Zm00001e019525_P002


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000156 (Archaeplastida) Phylogenetic Tree(s): OG0000156_tree ,
OG_05_0000074 (LandPlants) Phylogenetic Tree(s): OG_05_0000074_tree ,
OG_06_0000065 (SeedPlants) Phylogenetic Tree(s): OG_06_0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019525_P002
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00010p00119100 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.03 Archaeplastida
AT5G44340 TUB4 tubulin beta chain 4 0.05 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.02 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.02 Archaeplastida
Cpa|evm.model.tig00001067.14 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cpa|evm.model.tig00001067.6 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cre12.g542250 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cre12.g549550 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.07 Archaeplastida
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.03 Archaeplastida
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_18746 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
Gb_22609 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_28116 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Gb_32830 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os01g18050.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
LOC_Os01g59150.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
LOC_Os02g07060.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os05g34170.2 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.08 Archaeplastida
MA_10431251g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_251404g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 Archaeplastida
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Pp3c21_17300V3.1 No alias tubulin beta chain 2 0.06 Archaeplastida
Pp3c5_20340V3.1 No alias tubulin beta chain 2 0.04 Archaeplastida
Pp3c6_7400V3.1 No alias tubulin beta 8 0.03 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.02 Archaeplastida
Pp3c8_2420V3.1 No alias tubulin beta chain 2 0.01 Archaeplastida
Smo164404 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo23429 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Smo402668 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Smo408201 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Solyc06g005910.4.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e011926_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.09 Archaeplastida
Zm00001e012336_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Zm00001e017421_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 53 261
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 311 432
No external refs found!