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  5. Zm00001e019528_P002

Zm00001e019528_P002


Description : cyclin (CYCB)


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0000555 (SeedPlants) Phylogenetic Tree(s): OG_06_0000555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019528_P002
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.1 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 Archaeplastida
AT1G16330 CYCB3;1 cyclin b3;1 0.03 Archaeplastida
AT1G20610 CYCB2;3 Cyclin B2;3 0.09 Archaeplastida
AT1G76310 CYCB2;4 CYCLIN B2;4 0.12 Archaeplastida
AT2G17620 CYCB2;1 Cyclin B2;1 0.03 Archaeplastida
AT2G26760 CYCB1;4 Cyclin B1;4 0.06 Archaeplastida
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.11 Archaeplastida
AT4G35620 CYCB2;2 Cyclin B2;2 0.12 Archaeplastida
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.14 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.15 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.16 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.16 Archaeplastida
Gb_01761 No alias cyclin (CYCB) 0.08 Archaeplastida
Gb_03506 No alias cyclin (CYCB) 0.07 Archaeplastida
Gb_10664 No alias cyclin (CYCB) 0.1 Archaeplastida
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.09 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.17 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.19 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.19 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.2 Archaeplastida
MA_10393012g0020 No alias G2/mitotic-specific cyclin-2 OS=Antirrhinum majus... 0.05 Archaeplastida
MA_10428837g0030 No alias cyclin (CYCB) 0.11 Archaeplastida
MA_10433093g0020 No alias Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.1 Archaeplastida
MA_127335g0010 No alias cyclin (CYCB) 0.02 Archaeplastida
MA_19215g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_311439g0010 No alias cyclin (CYCB) 0.06 Archaeplastida
MA_738195g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.1 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.08 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.06 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.08 Archaeplastida
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.1 Archaeplastida
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.17 Archaeplastida
Solyc04g081660.3.1 No alias Cyclin-B2-4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc06g073610.3.1 No alias cyclin (CYCB) 0.05 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 187 312
IPR004367 Cyclin_C-dom 314 435
No external refs found!