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  5. Zm00001e019609_P001

Zm00001e019609_P001


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019609_P001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.01 Archaeplastida
LOC_Os01g57580.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os02g17680.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g42180.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Mp2g19970.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Smo28262 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g107490.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc01g150101.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc03g031450.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc03g120530.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g080710.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc07g063830.3.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc10g006640.3.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e007719_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e012002_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e025623_P002 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!