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  5. Zm00001e019734_P001

Zm00001e019734_P001


Description : transcription factor (TCP)


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019734_P001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.02 Archaeplastida
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.04 Archaeplastida
Gb_17863 No alias transcription factor (TCP) 0.03 Archaeplastida
Gb_38376 No alias transcription factor (TCP) 0.04 Archaeplastida
Gb_38377 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os12g42190.1 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_101752g0020 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_1379g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
MA_37369g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_52440g0010 No alias transcription factor (TCP) 0.05 Archaeplastida
MA_86651g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Solyc02g089020.2.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc03g115010.3.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc04g006980.1.1 No alias transcription factor (TCP) 0.04 Archaeplastida
Solyc05g009900.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc06g069460.3.1 No alias transcription factor (TCP) 0.05 Archaeplastida
Solyc07g053410.4.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e004148_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 50 110
No external refs found!