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  5. Zm00001e019743_P005

Zm00001e019743_P005


Description : malonyl-CoA synthetase (mtMCS)


Gene families : OG0002888 (Archaeplastida) Phylogenetic Tree(s): OG0002888_tree ,
OG_05_0006359 (LandPlants) Phylogenetic Tree(s): OG_05_0006359_tree ,
OG_06_0010599 (SeedPlants) Phylogenetic Tree(s): OG_06_0010599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019743_P005
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT3G16170 No alias AMP-dependent synthetase and ligase family protein 0.05 Archaeplastida
MA_9661283g0010 No alias Malonate--CoA ligase OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g07850.1 No alias malonyl-CoA synthetase (mtMCS) 0.02 Archaeplastida
Solyc12g044290.2.1 No alias Malonate--CoA ligase OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g044300.2.1 No alias malonyl-CoA synthetase (mtMCS) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 173 554
IPR025110 AMP-bd_C 569 654
No external refs found!