Zm00001e019933_P001


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019933_P001
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254310 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00076p00195870 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT4G01830 PGP5 P-glycoprotein 5 0.02 Archaeplastida
GSVIVT01021365001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_07563 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_10211 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_10216 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_32125 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_33057 No alias subfamily ABCB transporter 0.02 Archaeplastida
Gb_36497 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_138894g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c4_5170V3.1 No alias P-glycoprotein 11 0.02 Archaeplastida
Pp3c9_13390V3.1 No alias P-glycoprotein 6 0.02 Archaeplastida
Smo169182 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo75690 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004725 protein tyrosine phosphatase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 380 529
IPR011527 ABC1_TM_dom 67 310
IPR011527 ABC1_TM_dom 673 939
IPR003439 ABC_transporter-like 1011 1160
No external refs found!