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  5. Zm00001e020013_P001

Zm00001e020013_P001


Description : VTI group Qb-type SNARE protein


Gene families : OG0002040 (Archaeplastida) Phylogenetic Tree(s): OG0002040_tree ,
OG_05_0002709 (LandPlants) Phylogenetic Tree(s): OG_05_0002709_tree ,
OG_06_0003500 (SeedPlants) Phylogenetic Tree(s): OG_06_0003500_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020013_P001
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AT3G29100 ATVTI13, VTI13 vesicle transport V-snare 13 0.03 Archaeplastida
AT5G39510 SGR4, ZIG1,... Vesicle transport v-SNARE family protein 0.03 Archaeplastida
LOC_Os01g51120.1 No alias VTI group Qb-type SNARE protein 0.06 Archaeplastida
Solyc05g013050.3.1 No alias VTI group Qb-type SNARE protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!