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  5. Zm00001e020199_P001

Zm00001e020199_P001


Description : no hits & (original description: none)


Gene families : OG0001780 (Archaeplastida) Phylogenetic Tree(s): OG0001780_tree ,
OG_05_0002605 (LandPlants) Phylogenetic Tree(s): OG_05_0002605_tree ,
OG_06_0003028 (SeedPlants) Phylogenetic Tree(s): OG_06_0003028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020199_P001
Cluster HCCA: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00137050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT1G28420 HB-1 homeobox-1 0.03 Archaeplastida
AT5G44180 No alias Homeodomain-like transcriptional regulator 0.05 Archaeplastida
Cre03.g174500 No alias Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020605001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01021113001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
MA_2434g0010 No alias HOX-like transcription factor 0.03 Archaeplastida
Pp3c16_15110V3.1 No alias homeobox-1 0.05 Archaeplastida
Solyc02g077660.3.1 No alias HOX-like transcription factor 0.03 Archaeplastida
Solyc07g053610.3.1 No alias HOX-like transcription factor 0.03 Archaeplastida
Zm00001e026524_P003 No alias HOX-like transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!