Description : transcription factor (ARF)
Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0000395 (LandPlants) Phylogenetic Tree(s): OG_05_0000395_tree ,
OG_06_0002431 (SeedPlants) Phylogenetic Tree(s): OG_06_0002431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e020205_P004 | |
Cluster | HCCA: Cluster_234 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00021p00221770 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.05 | Archaeplastida | |
AMTR_s00155p00082980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.B3... | 0.05 | Archaeplastida | |
AT1G59750 | ARF1 | auxin response factor 1 | 0.03 | Archaeplastida | |
AT2G46530 | ARF11 | auxin response factor 11 | 0.05 | Archaeplastida | |
GSVIVT01004942001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.02 | Archaeplastida | |
GSVIVT01021553001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.04 | Archaeplastida | |
GSVIVT01032251001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | Archaeplastida | |
Gb_23186 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Gb_39685 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Gb_39686 | No alias | transcription factor (ARF) | 0.02 | Archaeplastida | |
LOC_Os01g48060.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
LOC_Os01g70270.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
LOC_Os02g06910.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os02g35140.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os04g57610.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
LOC_Os05g43920.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
LOC_Os05g48870.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
LOC_Os06g46410.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
LOC_Os11g32110.1 | No alias | transcription factor (ARF) | 0.09 | Archaeplastida | |
LOC_Os12g41950.1 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
MA_103763g0010 | No alias | Auxin response factor 6 OS=Arabidopsis thaliana... | 0.07 | Archaeplastida | |
MA_10430707g0020 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
MA_137387g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Mp2g02890.1 | No alias | Auxin response factor 19 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
Pp3c13_4720V3.1 | No alias | auxin response factor 6 | 0.04 | Archaeplastida | |
Pp3c14_16990V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c1_40270V3.1 | No alias | auxin response factor 6 | 0.03 | Archaeplastida | |
Pp3c4_13010V3.1 | No alias | auxin response factor 16 | 0.03 | Archaeplastida | |
Solyc01g103050.3.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Solyc03g031970.4.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc05g047460.3.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Solyc05g056040.3.1 | No alias | transcription factor (ARF) | 0.06 | Archaeplastida | |
Solyc06g075150.3.1 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida | |
Solyc12g042070.3.1 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e013191_P001 | No alias | transcription factor (ARF) | 0.05 | Archaeplastida | |
Zm00001e023038_P001 | No alias | transcription factor (ARF) | 0.03 | Archaeplastida | |
Zm00001e025163_P001 | No alias | transcription factor (ARF) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Neighborhood |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Neighborhood |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Neighborhood |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Neighborhood |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016301 | kinase activity | IEP | Neighborhood |
BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
MF | GO:0016409 | palmitoyltransferase activity | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
MF | GO:0016747 | transferase activity, transferring acyl groups other than amino-acyl groups | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
BP | GO:0036211 | protein modification process | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
BP | GO:0044042 | glucan metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Neighborhood |
BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No external refs found! |