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  5. Zm00001e020296_P001

Zm00001e020296_P001


Description : Protein trichome birefringence-like 20 OS=Arabidopsis thaliana (sp|q9m896|tbl20_arath : 335.0)


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0000825 (LandPlants) Phylogenetic Tree(s): OG_05_0000825_tree ,
OG_06_0001537 (SeedPlants) Phylogenetic Tree(s): OG_06_0001537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020296_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266030 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00006p00266110 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00088p00114920 evm_27.TU.AmTr_v1... Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana 0.03 Archaeplastida
AT5G15890 TBL21 TRICHOME BIREFRINGENCE-LIKE 21 0.03 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os01g46410.1 No alias Protein trichome birefringence-like 21 OS=Arabidopsis... 0.08 Archaeplastida
LOC_Os06g12840.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os06g12850.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.12 Archaeplastida
LOC_Os06g12870.1 No alias xyloglucan O-acetyltransferase (AXY4) 0.07 Archaeplastida
LOC_Os07g15230.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os07g15320.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_245850g0010 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
Pp3c16_2250V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Pp3c2_37020V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Archaeplastida
Solyc02g065600.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089680.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e015716_P001 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e030880_P002 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 107 385
IPR025846 PMR5_N_dom 54 106
No external refs found!