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  5. AT3G24600

AT3G24600


Description : Late embryogenesis abundant protein, group 2


Gene families : OG0001507 (Archaeplastida) Phylogenetic Tree(s): OG0001507_tree ,
OG_05_0000969 (LandPlants) Phylogenetic Tree(s): OG_05_0000969_tree ,
OG_06_0000844 (SeedPlants) Phylogenetic Tree(s): OG_06_0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24600
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT5G42860 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 Archaeplastida
Gb_00802 No alias microtubule-interacting component CC of cellulose... 0.03 Archaeplastida
LOC_Os04g59330.1 No alias microtubule-interacting component CC of cellulose... 0.04 Archaeplastida
Pp3c14_4400V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e007480_P002 No alias microtubule-interacting component CC of cellulose... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Neighborhood
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!