Zm00001e020345_P001

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0000278 (LandPlants) Phylogenetic Tree(s): OG_05_0000278_tree ,
OG_06_0011452 (SeedPlants) Phylogenetic Tree(s): OG_06_0011452_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020345_P001
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.03	Archaeplastida
AT2G44910	HB4, ATHB-4, ATHB4	homeobox-leucine zipper protein 4	0.07	Archaeplastida
AT3G60390	HAT3	homeobox-leucine zipper protein 3	0.07	Archaeplastida
AT5G47370	HAT2	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	0.04	Archaeplastida
GSVIVT01005821001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.06	Archaeplastida
Gb_12394	No alias	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa...	0.03	Archaeplastida
LOC_Os01g45570.1	No alias	transcription factor (HD-ZIP I/II)	0.12	Archaeplastida
LOC_Os03g12860.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os06g04870.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os09g27450.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os10g41230.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
MA_12174g0010	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
MA_57689g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
MA_78381g0010	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Pp3c9_22420V3.1	No alias	Homeobox-leucine zipper protein family	0.03	Archaeplastida
Solyc01g073910.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc02g091930.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc08g007270.4.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e000928_P002	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e003763_P001	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
Zm00001e007343_P003	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Zm00001e025216_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
BP	GO:0007050	cell cycle arrest	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
BP	GO:0022402	cell cycle process	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0045786	negative regulation of cell cycle	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
BP	GO:0048523	negative regulation of cellular process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	79	133
IPR003106	Leu_zip_homeo	135	168

External Links

No external refs found!

Zm00001e020345_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation