Zm00001e020795_P001


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0012083 (LandPlants) Phylogenetic Tree(s): OG_05_0012083_tree ,
OG_06_0012163 (SeedPlants) Phylogenetic Tree(s): OG_06_0012163_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020795_P001
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.14 Archaeplastida
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.19 Archaeplastida
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.03 Archaeplastida
AT3G17060 No alias Pectin lyase-like superfamily protein 0.09 Archaeplastida
AT5G07410 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT5G07420 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT5G07430 No alias Pectin lyase-like superfamily protein 0.13 Archaeplastida
AT5G19730 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G61680 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01023786001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.09 Archaeplastida
Gb_01459 No alias pectin methylesterase 0.02 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.03 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.04 Archaeplastida
Gb_38324 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os03g19610.1 No alias pectin methylesterase 0.13 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os11g43830.1 No alias pectin methylesterase 0.05 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.1 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.09 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.14 Archaeplastida
MA_10428610g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_181657g0020 No alias pectin methylesterase 0.02 Archaeplastida
MA_28575g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_304854g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_6149868g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_87592g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_99816g0010 No alias pectin methylesterase 0.02 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.04 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp4g01190.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_18650V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c16_19430V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c19_8330V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c25_15080V3.1 No alias pectin methylesterase 31 0.02 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35217V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c5_12660V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c5_12770V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_460V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Solyc05g052110.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc05g052120.4.1 No alias No annotation 0.05 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e040018_P001 No alias pectin methylesterase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 60 337
No external refs found!