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  5. Zm00001e020808_P001

Zm00001e020808_P001


Description : component NOT4 of mRNA deadenylation CCR4-NOT complex


Gene families : OG0002795 (Archaeplastida) Phylogenetic Tree(s): OG0002795_tree ,
OG_05_0002922 (LandPlants) Phylogenetic Tree(s): OG_05_0002922_tree ,
OG_06_0002646 (SeedPlants) Phylogenetic Tree(s): OG_06_0002646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020808_P001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT5G60170 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
LOC_Os12g01190.2 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
MA_26070g0010 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
Solyc04g049840.4.1 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.03 Archaeplastida
Solyc11g072590.3.1 No alias component NOT4 of mRNA deadenylation CCR4-NOT complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0019627 urea metabolic process IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043419 urea catabolic process IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 126 203
No external refs found!