1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e021026_P001

Zm00001e021026_P001


Description : Pentatricopeptide repeat-containing protein At1g09190 OS=Arabidopsis thaliana (sp|o80488|ppr23_arath : 295.0)


Gene families : OG0023137 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0000902 (SeedPlants) Phylogenetic Tree(s): OG_06_0000902_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021026_P001
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Gb_39962 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 Archaeplastida
MA_771696g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 306 325
IPR002885 Pentatricopeptide_repeat 231 260
IPR002885 Pentatricopeptide_repeat 406 431
IPR002885 Pentatricopeptide_repeat 195 222
IPR002885 Pentatricopeptide_repeat 332 378
No external refs found!