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  5. Zm00001e021159_P001

Zm00001e021159_P001


Description : mRNA-binding regulatory factor (UBP1)


Gene families : OG0002141 (Archaeplastida) Phylogenetic Tree(s): OG0002141_tree ,
OG_05_0002492 (LandPlants) Phylogenetic Tree(s): OG_05_0002492_tree ,
OG_06_0002145 (SeedPlants) Phylogenetic Tree(s): OG_06_0002145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021159_P001
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026404001 No alias Oligouridylate-binding protein 1B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01035575001 No alias Oligouridylate-binding protein 1B OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e003593_P002 No alias mRNA-binding regulatory factor (UBP1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 77 143
IPR000504 RRM_dom 162 232
IPR000504 RRM_dom 281 347
No external refs found!