Description : ATG8 autophagosome ubiquitin-fold protein
Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0001268 (LandPlants) Phylogenetic Tree(s): OG_05_0001268_tree ,
OG_06_0060590 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e021618_P001 | |
Cluster | HCCA: Cluster_186 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G06420 | ATG8H | Ubiquitin-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01027638001 | No alias | Vesicle trafficking.autophagosome formation.ATG8/ATG12... | 0.07 | Archaeplastida | |
Gb_21524 | No alias | ATG8 autophagosome ubiquitin-fold protein | 0.03 | Archaeplastida | |
LOC_Os04g53240.4 | No alias | ATG8 autophagosome ubiquitin-fold protein | 0.05 | Archaeplastida | |
LOC_Os11g01010.1 | No alias | ATG8 autophagosome ubiquitin-fold protein | 0.03 | Archaeplastida | |
Pp3c14_15110V3.1 | No alias | Ubiquitin-like superfamily protein | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Neighborhood |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004241 | Atg8-like | 45 | 148 |
No external refs found! |