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  5. Zm00001e021626_P001

Zm00001e021626_P001


Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG0000444 (Archaeplastida) Phylogenetic Tree(s): OG0000444_tree ,
OG_05_0000471 (LandPlants) Phylogenetic Tree(s): OG_05_0000471_tree ,
OG_06_0000318 (SeedPlants) Phylogenetic Tree(s): OG_06_0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021626_P001
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G49600 RBP47A, ATRBP47A RNA-binding protein 47A 0.04 Archaeplastida
AT5G19350 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.06 Archaeplastida
GSVIVT01031780001 No alias Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia 0.02 Archaeplastida
Gb_06023 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 Archaeplastida
LOC_Os07g33330.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.01 Archaeplastida
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida
MA_10433182g0010 No alias Polyadenylate-binding protein RBP47C OS=Arabidopsis... 0.01 Archaeplastida
MA_10433660g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.01 Archaeplastida
Smo100454 No alias Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc10g005260.3.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida
Zm00001e010479_P003 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 123 190
IPR000504 RRM_dom 317 380
IPR000504 RRM_dom 213 283
No external refs found!