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  5. Zm00001e021852_P001

Zm00001e021852_P001


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 386.0)


Gene families : OG0002304 (Archaeplastida) Phylogenetic Tree(s): OG0002304_tree ,
OG_05_0002049 (LandPlants) Phylogenetic Tree(s): OG_05_0002049_tree ,
OG_06_0002095 (SeedPlants) Phylogenetic Tree(s): OG_06_0002095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021852_P001
Cluster HCCA: Cluster_313

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00254940 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00031p00165100 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G00830 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020961.20 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020961.48 No alias No description available 0.02 Archaeplastida
Gb_14828 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os10g06130.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os11g14430.2 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.06 Archaeplastida
MA_10435174g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 Archaeplastida
Pp3c17_1210V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Smo169951 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc10g009220.3.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 283 351
IPR000504 RRM_dom 187 250
IPR000504 RRM_dom 107 177
No external refs found!