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  5. Zm00001e021906_P002

Zm00001e021906_P002


Description : RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana (sp|q8gz43|yzr3_arath : 210.0)


Gene families : OG0004588 (Archaeplastida) Phylogenetic Tree(s): OG0004588_tree ,
OG_05_0003728 (LandPlants) Phylogenetic Tree(s): OG_05_0003728_tree ,
OG_06_0003599 (SeedPlants) Phylogenetic Tree(s): OG_06_0003599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021906_P002
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
Gb_38289 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.02 Archaeplastida
MA_10427843g0020 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c4_8110V3.1 No alias Ran BP2/NZF zinc finger-like superfamily protein 0.02 Archaeplastida
Solyc05g015500.4.1 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 190 219
IPR001876 Znf_RanBP2 23 45
IPR001876 Znf_RanBP2 237 268
No external refs found!