Zm00001e022379_P002

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0015455 (SeedPlants) Phylogenetic Tree(s): OG_06_0015455_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e022379_P002
Cluster	HCCA: Cluster_235

Target	Alias	Description	ECC score	Gene Family Method
AT1G27045	No alias	Homeobox-leucine zipper protein family	0.02	Archaeplastida
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.02	Archaeplastida
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.02	Archaeplastida
AT4G40060	ATHB16, HB16, ATHB-16	homeobox protein 16	0.02	Archaeplastida
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.02	Archaeplastida
Cpa\|evm.model.tig00000789.4	No alias	RNA biosynthesis.transcriptional activation.HB...	0.01	Archaeplastida
GSVIVT01008065001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.03	Archaeplastida
Gb_07295	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os02g49700.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os03g08960.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os03g10210.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os08g32080.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os08g32085.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os09g35910.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
MA_60543g0010	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Pp3c25_13450V3.1	No alias	homeobox 1	0.02	Archaeplastida
Pp3c5_27150V3.1	No alias	homeobox protein 16	0.03	Archaeplastida
Pp3c6_2730V3.1	No alias	Homeobox-leucine zipper protein family	0.06	Archaeplastida
Pp3c7_2100V3.1	No alias	Homeobox-leucine zipper protein family	0.02	Archaeplastida
Solyc01g096320.3.1	No alias	transcription factor (HD-ZIP I/II)	0.06	Archaeplastida
Solyc02g086930.4.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc05g006980.3.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Solyc05g051460.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e010004_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e010637_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
CC	GO:0005875	microtubule associated complex	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0009056	catabolic process	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009439	cyanate metabolic process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016042	lipid catabolic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
CC	GO:0030286	dynein complex	IEP	Neighborhood
CC	GO:0044430	cytoskeletal part	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
BP	GO:1901575	organic substance catabolic process	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	77	130
IPR003106	Leu_zip_homeo	132	174

External Links

No external refs found!

Zm00001e022379_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation