AT1G02360

Description : Chitinase family protein

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000335 (LandPlants) Phylogenetic Tree(s): OG_05_0000335_tree ,
OG_06_0000542 (SeedPlants) Phylogenetic Tree(s): OG_06_0000542_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G02360
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	evm_27.TU.AmTr_v1...	Endochitinase A2 OS=Pisum sativum	0.03	Archaeplastida
AMTR_s00001p00243570	evm_27.TU.AmTr_v1...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.03	Archaeplastida
AMTR_s00066p00199730	evm_27.TU.AmTr_v1...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
AT1G05850	HOT2, ELP,...	Chitinase family protein	0.05	Archaeplastida
AT2G43590	No alias	Chitinase family protein	0.04	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.09	Archaeplastida
AT3G16920	CTL2, ATCTL2	chitinase-like protein 2	0.05	Archaeplastida
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.08	Archaeplastida
AT4G01700	No alias	Chitinase family protein	0.06	Archaeplastida
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.03	Archaeplastida
GSVIVT01035029001	No alias	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	Archaeplastida
GSVIVT01038116001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038120001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038126001	No alias	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Gb_05672	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.02	Archaeplastida
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_10203	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.04	Archaeplastida
Gb_14113	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 297.0)	0.03	Archaeplastida
Gb_14116	No alias	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 409.0)	0.03	Archaeplastida
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os01g18400.1	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.06	Archaeplastida
LOC_Os02g39330.1	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
LOC_Os04g09390.1	No alias	Lectin OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os05g33130.1	No alias	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
LOC_Os08g41100.1	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
LOC_Os09g32080.2	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.05	Archaeplastida
LOC_Os10g39680.1	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.03	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0020	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10435326g0010	No alias	Endochitinase EP3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_191308g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_295712g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	Archaeplastida
MA_3814373g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4343642g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_448160g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_4984466g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_726207g0010	No alias	Chitinase-like protein 1 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_80085g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.03	Archaeplastida
MA_8921185g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.03	Archaeplastida
MA_8960362g0010	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.04	Archaeplastida
MA_9376357g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp2g21810.1	No alias	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Mp2g24410.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Archaeplastida
Mp4g04430.1	No alias	no description available(sp\|q949h3\|chi1_hevbr : 210.0)	0.03	Archaeplastida
Mp4g20440.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.03	Archaeplastida
Pp3c13_4480V3.1	No alias	Chitinase family protein	0.03	Archaeplastida
Pp3c16_17090V3.1	No alias	homolog of carrot EP3-3 chitinase	0.02	Archaeplastida
Pp3c26_2880V3.1	No alias	Chitinase family protein	0.04	Archaeplastida
Smo428512	No alias	No description available	0.02	Archaeplastida
Smo443112	No alias	Basic endochitinase B OS=Arabidopsis thaliana	0.03	Archaeplastida
Solyc02g082960.3.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc10g055800.2.1	No alias	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.02	Archaeplastida
Zm00001e002252_P001	No alias	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e030152_P001	No alias	Basic endochitinase A OS=Secale cereale...	0.02	Archaeplastida
Zm00001e034566_P001	No alias	CTL cellulose microfibrils and hemicellulose interaction protein	0.03	Archaeplastida
Zm00001e041138_P001	No alias	Endochitinase B (Fragment) OS=Zea mays...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transport	RCA	Interproscan
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006829	zinc ion transport	IEP	Neighborhood
BP	GO:0006857	oligopeptide transport	IEP	Neighborhood
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006955	immune response	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008553	proton-exporting ATPase activity, phosphorylative mechanism	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009627	systemic acquired resistance	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009744	response to sucrose	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009749	response to glucose	IEP	Neighborhood
BP	GO:0009750	response to fructose	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009814	defense response, incompatible interaction	IEP	Neighborhood
BP	GO:0009958	positive gravitropism	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0009991	response to extracellular stimulus	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010054	trichoblast differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
MF	GO:0010283	pinoresinol reductase activity	IEP	Neighborhood
BP	GO:0010311	lateral root formation	IEP	Neighborhood
BP	GO:0010359	regulation of anion channel activity	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010393	galacturonan metabolic process	IEP	Neighborhood
BP	GO:0010683	tricyclic triterpenoid metabolic process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Neighborhood
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
BP	GO:0016126	sterol biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Neighborhood
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
BP	GO:0018126	protein hydroxylation	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEP	Neighborhood
BP	GO:0019471	4-hydroxyproline metabolic process	IEP	Neighborhood
BP	GO:0019511	peptidyl-proline hydroxylation	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032409	regulation of transporter activity	IEP	Neighborhood
BP	GO:0032412	regulation of ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
BP	GO:0034285	response to disaccharide	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
MF	GO:0036442	proton-exporting ATPase activity	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0043090	amino acid import	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0045087	innate immune response	IEP	Neighborhood
BP	GO:0045488	pectin metabolic process	IEP	Neighborhood
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0048364	root development	IEP	Neighborhood
BP	GO:0048468	cell development	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051552	flavone metabolic process	IEP	Neighborhood
BP	GO:0051554	flavonol metabolic process	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Neighborhood
BP	GO:0052546	cell wall pectin metabolic process	IEP	Neighborhood
BP	GO:0070838	divalent metal ion transport	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
MF	GO:0072509	divalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0072511	divalent inorganic cation transport	IEP	Neighborhood
BP	GO:0080003	thalianol metabolic process	IEP	Neighborhood
MF	GO:0080004	thalian-diol desaturase activity	IEP	Neighborhood
BP	GO:0080147	root hair cell development	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Neighborhood
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood
BP	GO:1902600	proton transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	34	265

External Links

No external refs found!

AT1G02360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation