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  5. Zm00001e022939_P001

Zm00001e022939_P001


Description : RSZ21/22 RNA splicing factor


Gene families : OG0002592 (Archaeplastida) Phylogenetic Tree(s): OG0002592_tree ,
OG_05_0002271 (LandPlants) Phylogenetic Tree(s): OG_05_0002271_tree ,
OG_06_0002305 (SeedPlants) Phylogenetic Tree(s): OG_06_0002305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022939_P001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00154210 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
AT2G24590 At-RSZ22a, RSZ22a RNA recognition motif and CCHC-type zinc finger domains... 0.06 Archaeplastida
Cre09.g408200 No alias RNA processing.RNA splicing.spliceosome-associated... 0.05 Archaeplastida
GSVIVT01020220001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 Archaeplastida
GSVIVT01033172001 No alias RNA processing.RNA splicing.spliceosome-associated... 0.08 Archaeplastida
MA_10435943g0010 No alias RSZ21/22 RNA splicing factor 0.03 Archaeplastida
Pp3c11_26750V3.1 No alias serine/arginine-rich 22 0.03 Archaeplastida
Pp3c7_5100V3.1 No alias serine/arginine-rich 22 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 86 101
IPR000504 RRM_dom 4 61
No external refs found!