Description : transcription factor (ARF)

Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0001322 (LandPlants) Phylogenetic Tree(s): OG_05_0001322_tree ,
OG_06_0001040 (SeedPlants) Phylogenetic Tree(s): OG_06_0001040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Zm00001e023038_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00072950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00211p00025860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AT1G19220 ARF19, IAA22, ARF11 auxin response factor 19 0.04 Archaeplastida
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.04 Archaeplastida
LOC_Os04g43910.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc04g081240.2.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e020205_P004 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e032423_P002 No alias transcription factor (ARF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 125 226
IPR010525 Auxin_resp 277 360
No external refs found!