1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e023144_P001

Zm00001e023144_P001


Description : D-class RAB GTPase


Gene families : OG0001076 (Archaeplastida) Phylogenetic Tree(s): OG0001076_tree ,
OG_05_0067104 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0060846 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023144_P001
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT5G47200 ATRAB1A, ATRABD2B, RAB1A RAB GTPase homolog 1A 0.03 Archaeplastida
Cpa|evm.model.tig00000455.19 No alias Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00001408.10 No alias Vesicle trafficking.regulation of membrane tethering and... 0.01 Archaeplastida
LOC_Os01g08450.1 No alias D-class RAB GTPase 0.02 Archaeplastida
Mp3g00710.1 No alias D-class RAB GTPase 0.01 Archaeplastida
Smo228158 No alias Vesicle trafficking.regulation of membrane tethering and... 0.01 Archaeplastida
Solyc05g052070.3.1 No alias D-class RAB GTPase 0.03 Archaeplastida
Solyc08g078070.4.1 No alias D-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 79 239
No external refs found!