Description : D-class RAB GTPase
Gene families : OG0001076 (Archaeplastida) Phylogenetic Tree(s): OG0001076_tree ,
OG_05_0067104 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0060846 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e023144_P001 | |
Cluster | HCCA: Cluster_108 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G47200 | ATRAB1A, ATRABD2B, RAB1A | RAB GTPase homolog 1A | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000455.19 | No alias | Ras-related protein RABD2c OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
Cpa|evm.model.tig00001408.10 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | Archaeplastida | |
LOC_Os01g08450.1 | No alias | D-class RAB GTPase | 0.02 | Archaeplastida | |
Mp3g00710.1 | No alias | D-class RAB GTPase | 0.01 | Archaeplastida | |
Smo228158 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | Archaeplastida | |
Solyc05g052070.3.1 | No alias | D-class RAB GTPase | 0.03 | Archaeplastida | |
Solyc08g078070.4.1 | No alias | D-class RAB GTPase | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Neighborhood |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016791 | phosphatase activity | IEP | Neighborhood |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Neighborhood |
MF | GO:0051287 | NAD binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 79 | 239 |
No external refs found! |