Zm00001e023206_P001

Description : regulatory subunit of geranyl diphosphate synthase complex. isoprenyl diphosphate synthase

Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0009623 (LandPlants) Phylogenetic Tree(s): OG_05_0009623_tree ,
OG_06_0006381 (SeedPlants) Phylogenetic Tree(s): OG_06_0006381_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e023206_P001
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AT4G36810	GGPS1	geranylgeranyl pyrophosphate synthase 1	0.02	Archaeplastida
Gb_26834	No alias	regulatory subunit of geranyl diphosphate synthase...	0.04	Archaeplastida
LOC_Os02g44780.1	No alias	regulatory subunit of geranyl diphosphate synthase...	0.03	Archaeplastida
Mp2g13280.1	No alias	isoprenyl diphosphate synthase	0.02	Archaeplastida
Pp3c21_14800V3.1	No alias	geranylgeranyl pyrophosphate synthase 1	0.03	Archaeplastida
Solyc09g008920.3.1	No alias	regulatory subunit of geranyl diphosphate synthase...	0.05	Archaeplastida
Zm00001e010623_P001	No alias	isoprenyl diphosphate synthase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
CC	GO:0098533	ATPase dependent transmembrane transport complex	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
CC	GO:1902495	transmembrane transporter complex	IEP	Neighborhood
CC	GO:1904949	ATPase complex	IEP	Neighborhood
CC	GO:1990351	transporter complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	87	274

External Links

No external refs found!