Description : RING-H2-class E3 ligase
Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002315 (SeedPlants) Phylogenetic Tree(s): OG_06_0002315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e023260_P001 | |
Cluster | HCCA: Cluster_256 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00198340 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | Archaeplastida | |
AMTR_s00002p00203540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | Archaeplastida | |
AMTR_s00022p00051710 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | Archaeplastida | |
AT2G44578 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
AT4G00305 | No alias | RING/U-box superfamily protein | 0.02 | Archaeplastida | |
AT5G53110 | No alias | RING/U-box superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01020210001 | No alias | No description available | 0.07 | Archaeplastida | |
Gb_15836 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
Gb_28973 | No alias | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | Archaeplastida | |
LOC_Os01g11460.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os01g11480.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os02g52210.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
LOC_Os02g57460.1 | No alias | RING-H2-class E3 ligase | 0.04 | Archaeplastida | |
LOC_Os04g49160.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
LOC_Os05g11860.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
LOC_Os06g08820.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
LOC_Os06g45580.1 | No alias | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
LOC_Os08g43670.1 | No alias | NEP1-interacting protein 2 OS=Arabidopsis thaliana... | 0.01 | Archaeplastida | |
LOC_Os09g29310.1 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
LOC_Os12g24490.1 | No alias | RING-H2-class E3 ligase | 0.01 | Archaeplastida | |
LOC_Os12g42540.1 | No alias | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
MA_10208579g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_159453g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_189618g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_229590g0010 | No alias | RING-H2-class E3 ligase | 0.03 | Archaeplastida | |
MA_308999g0010 | No alias | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
MA_308999g0020 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_43543g0010 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
MA_71146g0020 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
MA_8556123g0010 | No alias | no hits & (original description: none) | 0.09 | Archaeplastida | |
Mp1g19680.1 | No alias | NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Pp3c17_13190V3.1 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
Pp3c4_30240V3.1 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Archaeplastida | |
Pp3c5_4170V3.1 | No alias | RING/U-box superfamily protein | 0.01 | Archaeplastida | |
Smo101273 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | Archaeplastida | |
Solyc02g067700.1.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc11g066510.3.1 | No alias | RING-H2-class E3 ligase | 0.11 | Archaeplastida | |
Solyc12g087840.1.1 | No alias | RING-H2-class E3 ligase | 0.02 | Archaeplastida | |
Zm00001e002430_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e023969_P001 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006811 | ion transport | IEP | Neighborhood |
BP | GO:0006812 | cation transport | IEP | Neighborhood |
BP | GO:0006813 | potassium ion transport | IEP | Neighborhood |
BP | GO:0007165 | signal transduction | IEP | Neighborhood |
MF | GO:0008324 | cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015672 | monovalent inorganic cation transport | IEP | Neighborhood |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
BP | GO:0034220 | ion transmembrane transport | IEP | Neighborhood |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0071804 | cellular potassium ion transport | IEP | Neighborhood |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | Neighborhood |
BP | GO:0098655 | cation transmembrane transport | IEP | Neighborhood |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Neighborhood |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 99 | 143 |
No external refs found! |