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  5. Zm00001e023271_P001

Zm00001e023271_P001


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0000646 (SeedPlants) Phylogenetic Tree(s): OG_06_0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023271_P001
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
AMTR_s00015p00239460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00089p00043950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT1G72210 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G24140 FMA basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT3G61950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01000012001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01003437001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01009097001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_21105 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os04g50090.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os05g50900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
LOC_Os10g23050.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_57244g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc03g007410.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc05g053660.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g010340.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e023838_P003 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 81 131
No external refs found!