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  5. Zm00001e023286_P002

Zm00001e023286_P002


Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0001067 (LandPlants) Phylogenetic Tree(s): OG_05_0001067_tree ,
OG_06_0001032 (SeedPlants) Phylogenetic Tree(s): OG_06_0001032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023286_P002
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AT1G20490 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.03 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.02 Archaeplastida
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.03 Archaeplastida
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
GSVIVT01008694001 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01010358001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.02 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.07 Archaeplastida
Gb_19726 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
LOC_Os01g67540.1 No alias 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
LOC_Os02g46970.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.16 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.02 Archaeplastida
LOC_Os03g05780.1 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
LOC_Os06g44620.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
MA_56692g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Mp1g11670.1 No alias acyl-CoA synthetase (ACS5) 0.03 Archaeplastida
Pp3c13_8490V3.1 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.04 Archaeplastida
Pp3c19_13170V3.1 No alias 4-coumarate:CoA ligase 3 0.03 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.05 Archaeplastida
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo232017 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Solyc02g088710.3.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
Solyc03g111170.3.1 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g117870.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Zm00001e004865_P001 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e016374_P001 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
Zm00001e037698_P001 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 484 559
IPR000873 AMP-dep_Synth/Lig 49 475
No external refs found!