Zm00001e023292_P001


Description : no hits & (original description: none)


Gene families : OG0002755 (Archaeplastida) Phylogenetic Tree(s): OG0002755_tree ,
OG_05_0002363 (LandPlants) Phylogenetic Tree(s): OG_05_0002363_tree ,
OG_06_0002373 (SeedPlants) Phylogenetic Tree(s): OG_06_0002373_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023292_P001
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00246950 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.03 Archaeplastida
AT3G03060 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT5G16930 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Cre03.g144967 No alias No description available 0.02 Archaeplastida
GSVIVT01018945001 No alias Cell division control protein 48 homolog D... 0.03 Archaeplastida
GSVIVT01024407001 No alias 26S proteasome regulatory subunit 6A homolog OS=Solanum... 0.02 Archaeplastida
Gb_39829 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_24945g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g01020.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c5_16820V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Archaeplastida
Smo168159 No alias 26S proteasome regulatory subunit 6B homolog... 0.04 Archaeplastida
Solyc02g062700.3.1 No alias Cell division control protein 48 homolog D... 0.04 Archaeplastida
Solyc03g097020.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
InterPro domains Description Start Stop
IPR021911 DUF3523 67 335
IPR003959 ATPase_AAA_core 405 531
No external refs found!