1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e023478_P001

Zm00001e023478_P001


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000296 (SeedPlants) Phylogenetic Tree(s): OG_06_0000296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023478_P001
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.01 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.01 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.01 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.01 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.01 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.01 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.03 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.01 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.01 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01012777001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027810001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01037667001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_02419 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_23308 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os12g07610.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g112890.1.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc04g014470.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.02 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 71 111
IPR001005 SANT/Myb 14 61
No external refs found!