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  5. Zm00001e023523_P001

Zm00001e023523_P001


Description : helicase component eIF4A3 of RNA quality control Exon Junction complex


Gene families : OG0000822 (Archaeplastida) Phylogenetic Tree(s): OG0000822_tree ,
OG_05_0005548 (LandPlants) Phylogenetic Tree(s): OG_05_0005548_tree ,
OG_06_0007007 (SeedPlants) Phylogenetic Tree(s): OG_06_0007007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023523_P001

Target Alias Description ECC score Gene Family Method Actions
Mp2g02760.1 No alias mRNA unwinding factor (eIF4A) 0.01 Archaeplastida
Mp4g09540.1 No alias helicase component eIF4A3 of RNA quality control Exon... 0.01 Archaeplastida
Pp3c11_22980V3.1 No alias eukaryotic translation initiation factor 4A1 0.03 Archaeplastida
Pp3c19_19960V3.1 No alias eukaryotic initiation factor 4A-III 0.01 Archaeplastida
Pp3c6_1080V3.1 No alias eukaryotic translation initiation factor 4A1 0.02 Archaeplastida
Pp3s93_30V3.1 No alias eukaryotic translation initiation factor 4A1 0.02 Archaeplastida
Solyc06g062800.4.1 No alias mRNA unwinding factor (eIF4A) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 260 368
IPR011545 DEAD/DEAH_box_helicase_dom 59 221
No external refs found!