Zm00001e023552_P003


Description : component SMG8 of SMG1C protein kinase complex


Gene families : OG0007386 (Archaeplastida) Phylogenetic Tree(s): OG0007386_tree ,
OG_05_0008856 (LandPlants) Phylogenetic Tree(s): OG_05_0008856_tree ,
OG_06_0010786 (SeedPlants) Phylogenetic Tree(s): OG_06_0010786_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023552_P003
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020848.56 No alias No description available 0.01 Archaeplastida
GSVIVT01031463001 No alias No description available 0.05 Archaeplastida
LOC_Os02g57780.1 No alias component SMG8 of SMG1C protein kinase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019354 Smg8/Smg9 495 644
IPR019354 Smg8/Smg9 1021 1120
No external refs found!