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  5. Zm00001e023569_P001

Zm00001e023569_P001


Description : putative silicon efflux transporter (LSI2)


Gene families : OG0001845 (Archaeplastida) Phylogenetic Tree(s): OG0001845_tree ,
OG_05_0001690 (LandPlants) Phylogenetic Tree(s): OG_05_0001690_tree ,
OG_06_0003853 (SeedPlants) Phylogenetic Tree(s): OG_06_0003853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023569_P001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00226220 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.06 Archaeplastida
AMTR_s00168p00063100 evm_27.TU.AmTr_v1... Silicon efflux transporter LSI3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 Archaeplastida
Gb_28693 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida
LOC_Os02g57620.1 No alias putative silicon efflux transporter (LSI2) 0.04 Archaeplastida
LOC_Os03g01700.1 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
LOC_Os10g31040.3 No alias putative silicon efflux transporter (LSI2) 0.02 Archaeplastida
LOC_Os10g39980.1 No alias putative silicon efflux transporter (LSI2) 0.07 Archaeplastida
MA_10430496g0010 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
Pp3c12_25560V3.1 No alias Divalent ion symporter 0.03 Archaeplastida
Solyc03g025350.3.1 No alias putative silicon efflux transporter (LSI2) 0.05 Archaeplastida
Zm00001e000055_P001 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida
Zm00001e002282_P001 No alias putative silicon efflux transporter (LSI2) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 27 472
No external refs found!