1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G27490

AT3G27490


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001348 (Archaeplastida) Phylogenetic Tree(s): OG0001348_tree ,
OG_05_0000867 (LandPlants) Phylogenetic Tree(s): OG_05_0000867_tree ,
OG_06_0000460 (SeedPlants) Phylogenetic Tree(s): OG_06_0000460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27490
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G69150 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G04680 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 Archaeplastida
AT4G02190 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT4G13992 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT4G16015 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G16430 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G26190 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT5G29624 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 Archaeplastida
AT5G39471 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT5G42840 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT5G54040 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004737 pyruvate decarboxylase activity IEP Neighborhood
MF GO:0005275 amine transmembrane transporter activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Neighborhood
BP GO:0010306 rhamnogalacturonan II biosynthetic process IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0010396 rhamnogalacturonan II metabolic process IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
MF GO:0015105 arsenite transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015700 arsenite transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042350 GDP-L-fucose biosynthetic process IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0046368 GDP-L-fucose metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051606 detection of stimulus IEP Neighborhood
BP GO:0052325 cell wall pectin biosynthetic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 69 117
IPR004146 DC1 297 344
IPR004146 DC1 14 57
IPR004146 DC1 380 427
IPR004146 DC1 182 230
IPR004146 DC1 244 287
IPR004146 DC1 543 591
No external refs found!