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  5. Zm00001e023647_P001

Zm00001e023647_P001


Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 209.0)


Gene families : OG0000379 (Archaeplastida) Phylogenetic Tree(s): OG0000379_tree ,
OG_05_0000514 (LandPlants) Phylogenetic Tree(s): OG_05_0000514_tree ,
OG_06_0001859 (SeedPlants) Phylogenetic Tree(s): OG_06_0001859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023647_P001
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 Archaeplastida
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000605.6 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Cre12.g500550 No alias No description available 0.03 Archaeplastida
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01016259001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os06g05990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g32760.1 No alias Probable E3 ubiquitin-protein ligase WAVH2... 0.03 Archaeplastida
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_218345g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_2719537g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7835328g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc05g056140.4.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g069600.2.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041206_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 101 130
IPR002035 VWF_A 288 468
IPR032838 Vwaint_dom 632 704
No external refs found!