AT3G27590


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05095.1); Has 18 Blast hits to 18 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0005412 (Archaeplastida) Phylogenetic Tree(s): OG0005412_tree ,
OG_05_0004762 (LandPlants) Phylogenetic Tree(s): OG_05_0004762_tree ,
OG_06_0003099 (SeedPlants) Phylogenetic Tree(s): OG_06_0003099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27590
Cluster HCCA: Cluster_401

Target Alias Description ECC score Gene Family Method Actions
AT5G59060 No alias BEST Arabidopsis thaliana protein match is: RNA-directed... 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009756 carbohydrate mediated signaling IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009845 seed germination IEP Neighborhood
BP GO:0009933 meristem structural organization IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010182 sugar mediated signaling pathway IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0016101 diterpenoid metabolic process IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048532 anatomical structure arrangement IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0050826 response to freezing IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!