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  5. Zm00001e023720_P001

Zm00001e023720_P001


Description : RING-HC-class E3 ligase


Gene families : OG0001593 (Archaeplastida) Phylogenetic Tree(s): OG0001593_tree ,
OG_05_0002111 (LandPlants) Phylogenetic Tree(s): OG_05_0002111_tree ,
OG_06_0006099 (SeedPlants) Phylogenetic Tree(s): OG_06_0006099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023720_P001
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AT5G07270 XBAT33 XB3 ortholog 3 in Arabidopsis thaliana 0.04 Archaeplastida
Solyc03g026060.3.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 88 208
IPR020683 Ankyrin_rpt-contain_dom 20 81
IPR020683 Ankyrin_rpt-contain_dom 223 277
No external refs found!