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  5. Zm00001e023760_P001

Zm00001e023760_P001


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 345.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 84.7)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0004328 (LandPlants) Phylogenetic Tree(s): OG_05_0004328_tree ,
OG_06_0003745 (SeedPlants) Phylogenetic Tree(s): OG_06_0003745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023760_P001
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00141260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G19170 No alias Pectin lyase-like superfamily protein 0.18 Archaeplastida
AT2G23900 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G06770 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT3G42950 No alias Pectin lyase-like superfamily protein 0.01 Archaeplastida
AT4G23820 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.13 Archaeplastida
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01028246001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01028860001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01035089001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
Gb_06212 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
Gb_23151 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.07 Archaeplastida
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
LOC_Os01g43160.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
LOC_Os02g15690.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
LOC_Os02g54030.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.11 Archaeplastida
LOC_Os05g50960.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
LOC_Os09g26800.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
LOC_Os11g43750.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.06 Archaeplastida
Pp3c19_14240V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c4_24360V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c6_7160V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Solyc07g042160.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.09 Archaeplastida
Solyc08g081480.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Zm00001e021051_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Zm00001e026646_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034257_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 165 454
No external refs found!