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  5. AT3G27650

AT3G27650 (LBD25)


Aliases : LBD25

Description : LOB domain-containing protein 25


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27650
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01025126001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
Gb_19384 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Gb_19390 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_136689g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_19148g0010 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Pp3c20_10200V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Archaeplastida
Solyc05g048740.3.1 No alias transcription factor (AS2/LOB) 0.1 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006878 cellular copper ion homeostasis IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009804 coumarin metabolic process IEP Neighborhood
BP GO:0009805 coumarin biosynthetic process IEP Neighborhood
BP GO:0009838 abscission IEP Neighborhood
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010022 meristem determinacy IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010227 floral organ abscission IEP Neighborhood
BP GO:0010254 nectary development IEP Neighborhood
BP GO:0010363 regulation of plant-type hypersensitive response IEP Neighborhood
BP GO:0010434 bract formation IEP Neighborhood
BP GO:0010582 floral meristem determinacy IEP Neighborhood
BP GO:0010941 regulation of cell death IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015171 amino acid transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015802 basic amino acid transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016530 metallochaperone activity IEP Neighborhood
MF GO:0016531 copper chaperone activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0043067 regulation of programmed cell death IEP Neighborhood
BP GO:0043090 amino acid import IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055070 copper ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080135 regulation of cellular response to stress IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 39 135
No external refs found!