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  5. Zm00001e023858_P001

Zm00001e023858_P001


Description : 5-adenylylsulfate reductase-like 3 OS=Oryza sativa subsp. japonica (sp|q84p95|aprl3_orysj : 473.0)


Gene families : OG0003567 (Archaeplastida) Phylogenetic Tree(s): OG0003567_tree ,
OG_05_0002733 (LandPlants) Phylogenetic Tree(s): OG_05_0002733_tree ,
OG_06_0006167 (SeedPlants) Phylogenetic Tree(s): OG_06_0006167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023858_P001
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00202780 evm_27.TU.AmTr_v1... 5-adenylylsulfate reductase-like 3 OS=Oryza sativa... 0.03 Archaeplastida
AT1G34780 APRL4, ATAPRL4 APR-like 4 0.01 Archaeplastida
LOC_Os02g51850.1 No alias 5-adenylylsulfate reductase-like 3 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os08g31814.1 No alias 5-adenylylsulfate reductase-like 4 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 82 165
No external refs found!