Zm00001e023859_P001

Description : component psRPL29 of large ribosomal subunit proteome

Gene families : OG0005536 (Archaeplastida) Phylogenetic Tree(s): OG0005536_tree ,
OG_05_0004890 (LandPlants) Phylogenetic Tree(s): OG_05_0004890_tree ,
OG_06_0005473 (SeedPlants) Phylogenetic Tree(s): OG_06_0005473_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e023859_P001
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AT5G65220	No alias	Ribosomal L29 family protein	0.25	Archaeplastida
Cre06.g259850	No alias	No description available	0.12	Archaeplastida
Gb_13125	No alias	component psRPL29 of large ribosomal subunit proteome	0.08	Archaeplastida
LOC_Os02g51790.1	No alias	component psRPL29 of large ribosomal subunit proteome	0.2	Archaeplastida
MA_10268152g0010	No alias	component psRPL29 of large ribosomal subunit proteome	0.04	Archaeplastida
MA_10431457g0010	No alias	component psRPL29 of large ribosomal subunit proteome	0.08	Archaeplastida
MA_42151g0010	No alias	component psRPL29 of large ribosomal subunit proteome	0.02	Archaeplastida
Mp4g10390.1	No alias	component psRPL29 of large ribosomal subunit proteome	0.15	Archaeplastida
Pp3c15_20650V3.1	No alias	Ribosomal L29 family protein	0.11	Archaeplastida
Pp3c9_19800V3.1	No alias	Ribosomal L29 family protein	0.17	Archaeplastida
Solyc03g097950.4.1	No alias	no hits & (original description: none)	0.24	Archaeplastida
Solyc06g072470.4.1	No alias	component psRPL29 of large ribosomal subunit proteome	0.25	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Neighborhood
BP	GO:0006450	regulation of translational fidelity	IEP	Neighborhood
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_L29/L35	70	125

External Links

No external refs found!

Zm00001e023859_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation