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  5. Zm00001e023860_P001

Zm00001e023860_P001


Description : DIS3-like exonuclease 2 OS=Arabidopsis thaliana (sp|p0dm58|di3l2_arath : 771.0)


Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree ,
OG_05_0007837 (LandPlants) Phylogenetic Tree(s): OG_05_0007837_tree ,
OG_06_0008891 (SeedPlants) Phylogenetic Tree(s): OG_06_0008891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023860_P001
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001067.25 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01008904001 No alias DIS3-like exonuclease 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Mp3g18110.1 No alias Exosome complex exonuclease RRP44 homolog A... 0.02 Archaeplastida
Mp8g05460.1 No alias exoribonuclease (Dis3/RRP44) 0.02 Archaeplastida
Pp3c16_17530V3.1 No alias ribonuclease II family protein 0.03 Archaeplastida
Smo156135 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006189 'de novo' IMP biosynthetic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!