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  5. Zm00001e024045_P003

Zm00001e024045_P003


Description : no hits & (original description: none)


Gene families : OG0001532 (Archaeplastida) Phylogenetic Tree(s): OG0001532_tree ,
OG_05_0014366 (LandPlants) Phylogenetic Tree(s): OG_05_0014366_tree ,
OG_06_0012344 (SeedPlants) Phylogenetic Tree(s): OG_06_0012344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024045_P003
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AT3G26990 No alias ENTH/VHS family protein 0.04 Archaeplastida
GSVIVT01029899001 No alias No description available 0.08 Archaeplastida
Gb_26035 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g03570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g03340.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_12916g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_766870g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g09520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g094360.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g054410.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g012740.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006903 RNA_pol_II-bd 70 131
No external refs found!