AT3G27920 (ATMYB0, ATGL1, GL1, MYB0)

Aliases : ATMYB0, ATGL1, GL1, MYB0

Description : myb domain protein 0

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0015203 (SeedPlants) Phylogenetic Tree(s): OG_06_0015203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G27920
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00261750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AT3G01530	MYB57, ATMYB57	myb domain protein 57	0.03	Archaeplastida
AT4G05100	AtMYB74, MYB74	myb domain protein 74	0.03	Archaeplastida
AT5G06100	MYB33, ATMYB33	myb domain protein 33	0.04	Archaeplastida
GSVIVT01028091001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Gb_29933	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os01g16810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os02g40530.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os02g54520.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os03g04900.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
LOC_Os06g43090.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os07g43580.1	No alias	transcription factor (MYB)	0.04	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
MA_128871g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_173523g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_246142g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_81763g0010	No alias	transcription factor (MYB)	0.02	Archaeplastida
Pp3c15_7790V3.1	No alias	myb domain protein 55	0.03	Archaeplastida
Pp3c1_1650V3.1	No alias	myb domain protein 105	0.03	Archaeplastida
Pp3c1_4970V3.1	No alias	myb domain protein 106	0.03	Archaeplastida
Solyc02g093740.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g116100.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc06g009710.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e001803_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e007422_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e026426_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e030961_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e037956_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IMP	Interproscan
BP	GO:0001708	cell fate specification	RCA	Interproscan
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	TAS	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007267	cell-cell signaling	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009740	gibberellic acid mediated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009913	epidermal cell differentiation	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0023052	signaling	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	IMP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045168	cell-cell signaling involved in cell fate commitment	None	Extended
BP	GO:0048629	trichome patterning	IMP	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	Neighborhood
BP	GO:0002213	defense response to insect	IEP	Neighborhood
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0009786	regulation of asymmetric cell division	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0010026	trichome differentiation	IEP	Neighborhood
BP	GO:0010052	guard cell differentiation	IEP	Neighborhood
BP	GO:0010091	trichome branching	IEP	Neighborhood
BP	GO:0010374	stomatal complex development	IEP	Neighborhood
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0048445	carpel morphogenesis	IEP	Neighborhood
BP	GO:0090558	plant epidermis development	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:2000038	regulation of stomatal complex development	IEP	Neighborhood
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	69	114
IPR001005	SANT/Myb	16	63

External Links

No external refs found!

AT3G27920 (ATMYB0, ATGL1, GL1, MYB0)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation