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  5. Zm00001e024171_P001

Zm00001e024171_P001


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000302 (SeedPlants) Phylogenetic Tree(s): OG_06_0000302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024171_P001
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00235460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
GSVIVT01009691001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.08 Archaeplastida
GSVIVT01024579001 No alias No description available 0.07 Archaeplastida
LOC_Os01g43610.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os03g21870.1 No alias transcription factor (OFP) 0.06 Archaeplastida
LOC_Os04g33870.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os11g05770.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os11g05780.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os12g06160.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_23257g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
MA_31710g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
Pp3c18_15340V3.1 No alias ovate family protein 4 0.02 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e015439_P001 No alias transcription factor (OFP) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 391 447
No external refs found!