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  5. Zm00001e024176_P001

Zm00001e024176_P001


Description : 5-3 exoribonuclease 2 OS=Arabidopsis thaliana (sp|q9fq02|xrn2_arath : 608.0)


Gene families : OG0000811 (Archaeplastida) Phylogenetic Tree(s): OG0000811_tree ,
OG_05_0000830 (LandPlants) Phylogenetic Tree(s): OG_05_0000830_tree ,
OG_06_0014143 (SeedPlants) Phylogenetic Tree(s): OG_06_0014143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024176_P001
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021720.19 No alias 5-3 exoribonuclease 3 OS=Arabidopsis thaliana 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR004859 Put_53exo 1 258
No external refs found!