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  5. Zm00001e024393_P001

Zm00001e024393_P001


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0001192 (LandPlants) Phylogenetic Tree(s): OG_05_0001192_tree ,
OG_06_0004431 (SeedPlants) Phylogenetic Tree(s): OG_06_0004431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024393_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.05 Archaeplastida
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.05 Archaeplastida
Cre17.g698233 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01013452001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
Gb_26599 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os01g69830.1 No alias transcription factor (SBP) 0.03 Archaeplastida
LOC_Os06g49010.4 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_10427464g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_273100g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_47367g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
Zm00001e013795_P002 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 170 243
No external refs found!