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  5. Zm00001e024418_P001

Zm00001e024418_P001


Description : E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana (sp|q9zt42|rhf2a_arath : 194.0)


Gene families : OG0002665 (Archaeplastida) Phylogenetic Tree(s): OG0002665_tree ,
OG_05_0001857 (LandPlants) Phylogenetic Tree(s): OG_05_0001857_tree ,
OG_06_0001616 (SeedPlants) Phylogenetic Tree(s): OG_06_0001616_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024418_P001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT5G22000 RHF2A RING-H2 group F2A 0.03 Archaeplastida
GSVIVT01037523001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os11g36430.3 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 Archaeplastida
Pp3c13_14240V3.1 No alias RING-H2 group F2A 0.02 Archaeplastida
Solyc06g073860.2.1 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 Archaeplastida
Solyc06g073890.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011896_P004 No alias E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 32 73
No external refs found!