Description : BEST Arabidopsis thaliana protein match is: F-box family protein-related (TAIR:AT3G28330.1); Has 103 Blast hits to 100 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Gene families : OG0011020 (Archaeplastida) Phylogenetic Tree(s): OG0011020_tree ,
OG_05_0010975 (LandPlants) Phylogenetic Tree(s): OG_05_0010975_tree ,
OG_06_0010960 (SeedPlants) Phylogenetic Tree(s): OG_06_0010960_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT3G28280
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G15680 No alias F-box family protein 0.05 Archaeplastida
AT3G26010 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT3G28330 No alias F-box family protein-related 0.12 Archaeplastida
AT4G22430 No alias F-box family protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!